TCGAanalyze_networkInference {TCGAbiolinks} | R Documentation |
TCGAanalyze_networkInference taking expression data as input, this will return an adjacency matrix of interactions
TCGAanalyze_networkInference(data, optionMethod = "clr")
data |
expression data, genes in columns, samples in rows |
optionMethod |
inference method, chose from aracne, c3net, clr and mrnet |
an adjacent matrix