calculateCoveredProtein {SubCellBarCode} | R Documentation |
Given the proteomics data, number of overlapped marker proteins is calculated. Bar plot for each compartment is plotted.
calculateCoveredProtein(proteinIDs, markerproteins)
proteinIDs |
character; gene symbol id |
markerproteins |
character; 3365 proteins gene symbol ids |
covered.proteins
{ df <- loadData(SubCellBarCode::hcc827Ctrl) c.prots <- calculateCoveredProtein(rownames(df), markerProteins[,1]) }