geneTestability {SeqGSEA} | R Documentation |
This function is to determine each gene's testability. A gene is testable if at least one of its exons are testable.
geneTestability(RCS)
RCS |
a ReadCountSet object after exon testability checked, usually the output of |
This result can applied to filter out genes not expressed.
A logical vector indicating which genes are testable, i.e., having at least one exon testable.
Please run exonTestability
before run this function.
Xi Wang, xi.wang@newcastle.edu.au
exonTestability
,
subsetByGenes
data(RCS_example, package="SeqGSEA") RCS_example <- exonTestability(RCS_example, cutoff=5) geneTestable <- geneTestability(RCS_example) head(geneTestable)