exonTestability {SeqGSEA} | R Documentation |
Check exon testability, filtering out exons with very few (default: 5) read counts
exonTestability(RCS, cutoff = 5)
RCS |
a ReadCountSet object. |
cutoff |
exons with read counts less than this cutoff are to be marked as untestable. |
a ReadCountSet object with slot fData
updated.
Xi Wang, xi.wang@newcastle.edu.au
data(RCS_example, package="SeqGSEA") RCS_example <- exonTestability(RCS_example, cutoff=5) head(fData(RCS_example))