QCorrectionThresholding {Sconify}R Documentation

Corrects all p values for multiple hypotheses, sets threshold for which change values should be reported

Description

Given the number of comparisons we make across k-nearest neighborhoods, which is far more than that of disjoint subsetting, this step is important given that there is an increased likelihood that some statistically significant differences will occur by chance.

Usage

QCorrectionThresholding(cells, threshold)

Arguments

cells

tibble of change values, p values, and fraction condition 2

threshold

a q value below which the change values will be reported for that cell for that param. If no change is desired, this is set to 1.

Value

inputted p values, adjusted and therefore described as "q values"


[Package Sconify version 1.13.0 Index]