findCompatibleExon {SPLINTER} | R Documentation |
Finds compatible exon in annotation with the one present in roi object
findCompatibleExon(tx, roi, verbose = FALSE)
tx |
GRangesList object of transcripts |
roi |
|
verbose |
logical. printouts and messages. |
list of length 3
(1) GRangesList hits
(2) Number of transcripts
(3) Original number of input transcripts
Diana Low
compatible_exons <- findCompatibleExon(valid_cds,roi)