checkPrimer {SPLINTER} | R Documentation |
checkPrimer
checkPrimer(pp, genome, roi = NULL)
pp |
data.frame defining primers, or output of |
genome |
BSgenome object |
roi |
|
list of GRanges with primer locations
Diana Low
# create a primer pair roi primer_pair <- data.frame(PRIMER_LEFT_SEQUENCE="agctcttgaaattggagctgac", PRIMER_RIGHT_SEQUENCE="cttagaaagaacaggaaatcc", stringsAsFactors=FALSE)