detectFileFormat {Rqc}R Documentation

Detect file format

Description

Detect file format

Usage

detectFileFormat(file)

Arguments

file

file name

Value

FastqFile or BamFiles objects

Examples

folder <- system.file(package="ShortRead", "extdata/E-MTAB-1147")
files <- list.files(full.names=TRUE, path=folder)
input <- lapply(files, detectFileFormat)
sapply(input, class)

[Package Rqc version 1.27.1 Index]