rnb.export.to.ewasher {RnBeads} | R Documentation |
Data exported to a format compatible with the FaST-LMM-EWASher tool for cell-mixture adjustment. see Zou, J., et al., Nature Methods, 2014 for further details on the tool.
rnb.export.to.ewasher(rnb.set, out.dir, reg.type = "sites", ...)
rnb.set |
Object of class |
out.dir |
output directory. If not existing, it will be created and all exported files will be placed here. If existing, this functions results in an error. |
reg.type |
region type to be exported |
... |
passed on to |
a list containing information on the export
Fabian Mueller
library(RnBeads.hg19) data(small.example.object) logger.start(fname=NA) rnb.export.to.ewasher(rnb.set.example,tempfile(pattern="forEwasher"))