pathways {ReactomeGSA} | R Documentation |
Combines and returns the pathways of all analysed datasets.
pathways(x, ...)
x |
ReactomeAnalysisResult. |
... |
Additional parameters for specific implementations. |
A data.frame
containing all merged pathways.
Other ReactomeAnalysisResult functions:
get_result()
,
names,ReactomeAnalysisResult-method
,
open_reactome()
,
plot_correlations()
,
plot_gsva_heatmap()
,
plot_gsva_pathway()
,
plot_heatmap()
,
plot_volcano()
,
reactome_links()
,
result_types()
# load an example result library(ReactomeGSA.data) data(griss_melanoma_result) # get the combined pathway result pathway_result <- pathways(griss_melanoma_result) head(pathway_result)