getSchemaClass {ReactomeContentService4R} | R Documentation |
Fetch instances by Class. All Classes see Reactome data schema.
getSchemaClass( class, species = NULL, all = FALSE, rows = 1000, minimised = FALSE, reference = FALSE )
class |
schema class name |
species |
name or taxon id or dbId or abbreviation of species. Only Event and PhysicalEntity classes can specify species |
all |
to return ALL entries or not, default is |
rows |
the number of entries retrieved, default is 1000 |
minimised |
to retrieve simplified entries (db id, stable id, displayName, type) or not, default is |
reference |
to retrieve simplified reference objects (db id, external identifier,
external database name) or not, default is |
a sorted dataframe containing entries that belong to the specified schema class
Other getContent:
getEntities()
,
getEventsHierarchy()
,
getOrthology()
,
getParticipants()
,
getPathways()
,
getPerson()
,
getSpecies()
,
query()
## Not run: getSchemaClass(class="Drug", all=TRUE) ## End(Not run) getSchemaClass(class="Regulation", rows=20, minimised=TRUE) getSchemaClass(class="Complex", species="pig", rows=10)