getStudiesWithSpecificAssayData {RImmPort} | R Documentation |
Get a list of studies that have specific assay type data
getStudiesWithSpecificAssayData(assay_type, all_study_ids = c("ALL"))
assay_type |
Assay Type |
all_study_ids |
List of study indentifiers to search on |
List of study indentifiers
library(DBI) library(sqldf) studies_dir <- system.file("extdata", "ImmPortStudies", package = "RImmPort") db_dir <- file.path(studies_dir, "Db") sqlite_conn <- dbConnect(SQLite(), dbname=file.path(db_dir, "ImmPort.sqlite")) setImmPortDataSource(sqlite_conn) study_ids <- getStudiesWithSpecificAssayData("ELISPOT")