getFastaFromFasInput {PhyloProfile} | R Documentation |
Get fasta sequences from main input file in multi-fasta format
getFastaFromFasInput(seqIDs = NULL, file = NULL)
seqIDs |
list of sequences IDs. Set seqIDs = "all" if you want to get all fasta sequences from the input file. |
file |
raw phylogenetic profile input file in multi-fasta format. |
A dataframe with one column contains sequences in fasta format.
Vinh Tran tran@bio.uni-frankfurt.de
file <- system.file( "extdata", "test.main.fasta", package = "PhyloProfile", mustWork = TRUE ) getFastaFromFasInput("all", file)