plotKinaseNetwork {PhosR} | R Documentation |
Plot kinase network
plotKinaseNetwork(KSR, predMatrix, threshold = 0.9, color, type = NULL, verbose = FALSE)
KSR |
Kinase-substrate relationship scoring results |
predMatrix |
Output of kinaseSubstratePred function |
threshold |
Threshold used to select interconnected kinases for the expanded signalomes |
color |
A string specifying the color vector for nodes |
type |
A type ( |
verbose |
Default to |
a graphical plot