runMAST {POWSC}R Documentation

Run DE analysis by using MAST. Here we output two result tables corresponding to two forms of DE genes. These parameters include four gene-wise parameters and two cell-wise parameters.

Description

Run DE analysis by using MAST. Here we output two result tables corresponding to two forms of DE genes. These parameters include four gene-wise parameters and two cell-wise parameters.

Usage

runMAST(sce)

Arguments

sce

is a simulated scRNA-seq dataset with two-group conditions, e.g., treatment vs control.

Value

a list of three tables: the first table summaries the DE result for both forms of DE genes. cont table represents the result for continous case. disc table shows the result for discontinous case.


[Package POWSC version 1.1.0 Index]