genes_score-methods {PFP}R Documentation

The score of genes in PFP class

Description

This function extract the detail scores of every gene in the gene_list by specific condition.

Usage

genes_score(
  object,
  index = NULL,
  index_type = c("pathway_id", "pathway_name", "slice")
)

## S4 method for signature 'PFP'
genes_score(
  object,
  index = NULL,
  index_type = c("pathway_id", "pathway_name", "slice")
)

Arguments

object,

PFP class

index,

character, indicating the groups to subset.

index_type,

"pathway_id","pathway_name","slice"

Value

a named vector of numeric scores

See Also

PFP-class

Examples

data(PFP_test1)
genes_score <- genes_score(PFP_test1)

[Package PFP version 1.1.0 Index]