trans_graph2PFPRefnet {PFP}R Documentation

translate graph_list to PFPRefnet class

Description

This function will translate all graphs in graph_list to a PFPRefnet-class object.

Usage

trans_graph2PFPRefnet(graph_list, pathway_info)

Arguments

graph_list,

a list of graphNEL.

pathway_info,

a data.frame, which contains all kegg pathways "index", "id","name","group","species"

Details

translating all graphs in graph_list to a PFPRefnet-class object. The pathway_info can be designed by yourself, but the colnames must be "index","id","name","group" and "species".

Value

a PFPRefnet

Examples

data(PFPRefnet_hsa)
PFPRefnet_hsa

[Package PFP version 1.1.0 Index]