perform.query.timeseries {OncoScore} | R Documentation |
perforn the query to PubMed for the time series analysis
perform.query.timeseries( list.of.genes, list.of.datatimes, gene.num.limit = 100, timepoints.limit = 10, custom.search = NA )
list.of.genes |
The list of genes to be used in the queries to PubMed |
list.of.datatimes |
The list of time points to be used in the queries to PubMed |
gene.num.limit |
A limit to the genes to be considered in the analysis; this is done to limit the number of queries to PubMed |
timepoints.limit |
A limit to the time points to be considered in the analysis; this is done to limit the number of queries to PubMed |
custom.search |
A custom set of keyworkds to be used when quering PubMed |
The frequencies of the genes in the cancer related documents and in all the documents retireved on PubMed at the specified time points
data(genes) data(timepoints)