kegg_pathway_list {OmnipathR} | R Documentation |
Retrieves a list of available KEGG pathways.
kegg_pathway_list()
Data frame of pathway names and identifiers.
kegg_pws <- kegg_pathway_list() kegg_pws # # A tibble: 521 x 2 # id name # <chr> <chr> # 1 map01100 Metabolic pathways # 2 map01110 Biosynthesis of secondary metabolites # 3 map01120 Microbial metabolism in diverse environments # 4 map01200 Carbon metabolism # 5 map01210 2-Oxocarboxylic acid metabolism # 6 map01212 Fatty acid metabolism # 7 map01230 Biosynthesis of amino acids # # . with 514 more rows