numCodons {ORFik}R Documentation

Get number of codons

Description

Length of object / 3. Choose either only whole codons, or with stubs. ORF stubs are not relevant, since there are no correctly defined ORFs that are 17 bases long etc.

Usage

numCodons(grl, as.integer = TRUE, keep.names = FALSE)

Arguments

grl

a GRangesList object

as.integer

a logical (TRUE), remove stub codons

keep.names

a logical (FALSE)

Value

an integer vector


[Package ORFik version 1.13.14 Index]