updateTxdbStartSites {ORFik}R Documentation

Update start sites of leaders

Description

Update start sites of leaders

Usage

updateTxdbStartSites(txList, fiveUTRs, removeUnused)

Arguments

txList

a list, call of as.list(txdb)

fiveUTRs

a GRangesList of 5' leaders

removeUnused

logical (FALSE), remove leaders that did not have any cage support. (standard is to set them to original annotation)

Value

a list, modified call of as.list(txdb)


[Package ORFik version 1.13.14 Index]