getGRanges {ORFik}R Documentation

Internal GRanges loader from fst data.frame

Description

Internal GRanges loader from fst data.frame

Usage

getGRanges(df, seqinfo = NULL)

Arguments

df

a data.frame with columns minimum 4 columns: seqnames, start, strand and width.
Additional columns will be assigned as meta columns

seqinfo

Seqinfo object, defaul NULL (created from ranges). Add to avoid warnings later on differences in seqinfo.

Value

GRanges object


[Package ORFik version 1.13.14 Index]