codonStartStop {ORFhunteR} | R Documentation |
This function scans a nucleotide sequence of interest in the search of canonical start codon ATG or non-canonical start codons GTG, TTG and CTG as well as stop codons TAA, TAG and TGA.
codonStartStop(x)
x |
character string giving the nucleotide sequence. |
list of potential start and stop codons with their coordinates.
Vasily V. Grinev
codons <- codonStartStop(x = "AAAATGGCATGGTAAGTC")