writeNanoStringRccSet {NanoStringNCTools} | R Documentation |
Write NanoString Reporter Code Count (RCC) files from an instance of class
NanoStringRccSet
.
writeNanoStringRccSet(x, dir = getwd())
x |
an instance of class |
dir |
An optional character string representing the path to the directory for the RCC files. |
Writes a set of NanoString Reporter Code Count (RCC) files based upon x
in dir
.
A character vector containing the paths for all the newly created RCC files.
Patrick Aboyoun
NanoStringRccSet
, readNanoStringRccSet
datadir <- system.file("extdata", "3D_Bio_Example_Data", package = "NanoStringNCTools") rccs <- dir(datadir, pattern = "SKMEL.*\\.RCC$", full.names = TRUE) solidTumorNoRlfPheno <- readNanoStringRccSet(rccs) writeNanoStringRccSet(solidTumorNoRlfPheno, tempdir()) for (i in seq_along(rccs)) { stopifnot(identical(readLines(rccs[i]), readLines(file.path(tempdir(), basename(rccs[i]))))) }