getParams {NPARC} | R Documentation |
Control parameters for model fitting
getParams(start = c(Pl = 0, a = 550, b = 10), maxAttempts = 100)
start |
Numeric vector of start parameters for the melting curve equation |
maxAttempts |
Number of resampling steps in case of unsuccessful model fits |
list of two elements: 1) "start" listing the starting parameters for melting curve fitting, 2) "maxAttempts" listing the maximal number of attempts the fit should be allowed
data(stauro_TPP_data_tidy) df <- dplyr::filter(stauro_TPP_data_tidy, grepl("MAPK|ATP|CDK|GTP|CRK", uniqueID)) testResults <- runNPARC(x = df$temperature, y = df$relAbundance, id = df$uniqueID, groupsAlt = df$compoundConcentration, dfType = "empirical", control = getParams(maxAttempts = 50))