get_chain_file {MungeSumstats} | R Documentation |
Download chain file for liftover
get_chain_file( build_conversion = c("hg38ToHg19", "hg19ToHg38"), ucsc_ref = c("hg19", "hg38"), save_dir = tempdir(), verbose = TRUE )
build_conversion |
converting from what build to what? hg38ToHg19 or hg19ToHg38 |
ucsc_ref |
converting from what? hg19 or hg38 |
save_dir |
where is the chain file saved? Default is a temp directory |
verbose |
extra messages printed? Default is TRUE |
loaded chain file for liftover