load_snp_loc_data {MungeSumstats} | R Documentation |
Loads the SNP locations and alleles for Homo sapiens extracted from NCBI dbSNP Build 144. Reference genome version is dependent on user input.
load_snp_loc_data(ref_genome, msg = NULL)
ref_genome |
name of the reference genome used for the GWAS (GRCh37 or GRCh38) |
msg |
Optional name of the column missing from the dataset in question |
SNP_LOC_DATA SNP positions and alleles for Homo sapiens extracted from NCBI dbSNP Build 144
SNP_LOC_DATA <- load_snp_loc_data("GRCH37")