add_eset {MultiDataSet} | R Documentation |
eSet
to MultiDataSet
.This method adds or overwrites a slot of a MultiDataSet
with the content
of the given eSet
.
add_eset( object, set, dataset.type, dataset.name = NULL, sample.tables = NULL, feature.tables = NULL, warnings = TRUE, overwrite = FALSE, GRanges )
object |
|
set |
Object derived from |
dataset.type |
Character with the type of data of the omic set (e.g. expression, methylation...) |
dataset.name |
Character with the specific name for this set (NULL by default). It is useful when there are several sets of the same type (e.g. multiple expression assays) |
sample.tables |
Character with the names of the slots with sample data besides phenoData. |
feature.tables |
Character with the names of the slots with feature data besides featureData. |
warnings |
Logical to indicate if warnings will be displayed. |
overwrite |
Logical to indicate if the set stored in the slot will be overwritten. |
GRanges |
|
A new MultiDataSet
with a slot filled.
add_methy
, add_genexp
, add_rnaseq
, add_snps
multi <- createMultiDataSet() eset <- new("ExpressionSet", exprs = matrix(runif(10), 5)) multi <- add_eset(multi, eset, "exampledata", GRanges = NA)