inner_relPlot {MultiBaC} | R Documentation |
inner_relPLot
inner_relPlot(mbac, comp2plot = c(1, 2), ...)
mbac |
Object of class mbac generated by *MultiBaC* or *genModelList*. |
comp2plot |
Indicates which components are plotted. Default is "c(1,2)", which means that just the inner relation plot of components 1 and 2 are shown. If more components are indicated, the function will return as many plots as needed to show all the components. |
... |
Other graphical parameters |
Inner relation plot for PLS models is displayed.
data('multiyeast') my_mbac <- createMbac (inputOmics = list(A.rna, A.gro, B.rna, B.ribo, C.rna, C.par), batchFactor = c("A", "A", "B", "B", "C", "C"), experimentalDesign = list("A" = c("Glu+", "Glu+", "Glu+", "Glu-", "Glu-", "Glu-"), "B" = c("Glu+", "Glu+", "Glu-", "Glu-"), "C" = c("Glu+", "Glu+", "Glu-", "Glu-")), omicNames = c("RNA", "GRO", "RNA", "RIBO", "RNA", "PAR")) my_final_mbac <- MultiBaC (my_mbac, test.comp = NULL, scale = FALSE, center = TRUE, crossval = NULL, Variability = 0.90, Interaction = TRUE , showplot = FALSE, showinfo = FALSE) inner_relPlot (my_final_mbac)