make_MQCombined {MQmetrics} | R Documentation |
Read MaxQuant Tables From Directory
make_MQCombined(MQPathCombined, remove_contaminants = TRUE)
MQPathCombined |
The directory to the "combined" folder where the MaxQuant results are stored. |
remove_contaminants |
Whether or not to remove contaminants, reverse and identified by one one peptide. |
The files from the MaxQuant with the contaminants and Reverse hits removed.
MQPathCombined <- system.file("extdata/combined/", package = "MQmetrics") MQCombined <- make_MQCombined(MQPathCombined)