PlotAndromedaScore {MQmetrics}R Documentation

Andromeda score for the best associated MS/MS spectrum.

Description

Andromeda score for the best associated MS/MS spectrum.

Usage

PlotAndromedaScore(MQCombined, palette = "Set2", plots_per_page = 5)

Arguments

MQCombined

Object list containing all the files from the MaxQuant output. It is the result from using make_MQCombined.

palette

The palette from the Package RColorBrewer. By default is 'Set2'.

plots_per_page

Establish the maximum number of plots per page.

Value

Plots the MaxQuant Andromeda Score.

Examples

MQPathCombined <- system.file("extdata/combined/", package = "MQmetrics")
MQCombined <- make_MQCombined(MQPathCombined)
PlotAndromedaScore(MQCombined)

[Package MQmetrics version 1.1.8 Index]