initialiseImpulseParameters {LineagePulse}R Documentation

Estimate impulse model parameter initialisations

Description

The initialisations reflect intuitive parameter choices corresponding to a peak and to a valley model and are based natural cubic spline fits in log space with a gaussian noise model.

Usage

initialiseImpulseParameters(vecCounts, lsMuModelGlobal)

Arguments

vecCounts

(count vector number of samples) Count data.

lsMuModelGlobal

(list) Object containing meta-data of gene-wise mean parameter models.

Value

list (length 2)

Author(s)

David Sebastian Fischer

See Also

Called by impulse model fitting wrappers: fitImpulseZINB.


[Package LineagePulse version 1.13.0 Index]