runDEAnalysis {LineagePulse}R Documentation

Differential expression analysis

Description

Performs differential expression analysis based on previously estimated null and alternative models. (I) Compute loglikelihood of data under null H0 and alternative H1 model. (II) Differential expression analysis as loglikelihood ratio test.

Usage

runDEAnalysis(objLP)

Arguments

objLP

(LineagePulseObject) LineagePulseObject with fitted null and alternative models.

Value

objLP (LineagePulseObject) LineagePulseObject with analysis summary table (dfResults) added.

Author(s)

David Sebastian Fischer

See Also

Called by runLineagePulse.


[Package LineagePulse version 1.13.0 Index]