find_segmentationSites {InPAS} | R Documentation |
Find optimal segmentation sites by minimizing MSE
find_segmentationSites( .ele, search_point_START, search_point_END, n = 1, savedID = NA )
.ele |
3' UTR coverage |
search_point_START |
start position to calculate |
search_point_END |
end position to calculate |
n |
the length of output. If set to -1, return all candidate CP sites |
savedID |
the proximal CPsites |
a list of MSE and candidate APA sites
Jianhong Ou