PlotHeatmap {IRISFGM} | R Documentation |
PlotHeatmap
plot heatmap based on bicluster
PlotHeatmap(object, ...) .plotHeatmap( object = object, N.bicluster = c(1, 5), show.overlap = FALSE, show.annotation = FALSE, show.clusters = FALSE ) ## S4 method for signature 'IRISFGM' PlotHeatmap( object = object, N.bicluster = c(1, 5), show.overlap = FALSE, show.annotation = FALSE, show.clusters = FALSE )
object |
Input IRISFGM object |
... |
other arguments passed to methods |
N.bicluster |
Number of biclusters. |
show.overlap |
Parameter (logic) indicates whether the figure shows the overlap part between two selected biclusters. |
show.annotation |
Parameter (logic) indicates whether to show annotation (biclusters number and cell cluster labels). |
show.clusters |
Parameter (logic) indicates whether to show the cell cluster label. |
It will generate a heatmap based on selected two FGMs.
data(example_object) PlotHeatmap(example_object, N.bicluster = c(1,20), show.annotation = TRUE, show.cluster =TRUE)