calculateCTDD {HPiP}R Documentation

Calculate CTD Descriptors - Distribution (D)

Description

This function calculates Distribution (D) descriptor for data input.

Usage

calculateCTDD(x)

Arguments

x

A data.frame containing gene/protein names and their fasta sequences.

Details

calculateCTDD

Value

A length 105 named vector for the data input.

Author(s)

Matineh Rahmatbakhsh, matinerb.94@gmail.com

References

Dubchak, I., Muchnik, I., Holbrook, S. R., and Kim, S.-H. (1995). Prediction of protein folding class using global description of amino acid sequence.Proc. Natl. Acad. Sci. 92, 8700–8704.

See Also

See calculateCTDC and calculateCTDT for Composition and Transition descriptors.

Examples

data(UP000464024_df)
x_df <- calculateCTDD(UP000464024_df)
head(x_df, n = 1L)

[Package HPiP version 0.99.18 Index]