gtoxImportThermoDB {GladiaTOX} | R Documentation |
This function accesses the ThermoDB webservices and imports data from ThermoDB to the gtox database.
gtoxImportThermoDB(asid, verbose = TRUE, write = FALSE, store = "STORE", type = "mc", curlurl = "https://YOUR_THERMODB_SERVER_HOSTNAME/HTTPHCSConnect")
asid |
Integer, the assay study/source ID to import data for |
verbose |
Logical, should the output from the curl be displayed? |
write |
Logical, should the data be written to the database, or just returned? |
store |
Character, the name of the store on ThermoDB to query |
type |
Character, the data type: 'mc' or 'sc' |
curlurl |
URL of the webservice |
Data table with content fetched from Thermo DB.
## Fetches data from ThermoDB to load in GladiaTOX DB prior processing conf_store <- gtoxConfList() gtoxConfDefault() ## Not run: ## Fetch data from ThermoDB dat <- gtoxImportThermoDB(asid=1L) ## End(Not run) ## Reset configuration options(conf_store)