prepareDatForDB {GladiaTOX} | R Documentation |
This function is a wrapper to ease the creation of the dataframe containing data and metadata to be loaded in the database
prepareDatForDB(asid, dat)
asid |
Integer, the asid value(s) to assign the default methods to |
dat |
Data.table containing metadata and data to load in DB |
This function formats a dat table to be loaded in DB
Data table with data and metadata to store in database
## Not run: ## Load sample data load(system.file("extdata", "data_for_vignette.rda", package="GladiaTOX")) # Build assay table assay <- buildAssayTab(plate, chnmap) ## Set study parameters std.nm <- "SampleStudy" # study name phs.nm <- "PhaseII" # study phase ## Delete previously loaded study data asid = gtoxLoadAsid(fld=c("asnm", "asph"), val=list(std.nm, phs.nm))$asid if(length(asid)>0){ deleteStudy(asid=asid) } ## Load annotation in gtoxDB loadAnnot(plate, assay, NULL) ## Get the created study ID asid = gtoxLoadAsid(fld = c("asnm", "asph"), val = list(std.nm, phs.nm))$asid ## Prepare and load data dat <- prepareDatForDB(asid, dat) ## End(Not run)