shake_davidResult {GeneTonic} | R Documentation |
Convert the output of DAVID for straightforward use in GeneTonic()
shake_davidResult(david_output_file)
david_output_file |
The location of the text file output, as exported from DAVID |
A data.frame
compatible for use in GeneTonic()
as res_enrich
Other shakers:
shake_enrichResult()
,
shake_enrichrResult()
,
shake_fgseaResult()
,
shake_gprofilerResult()
,
shake_gsenrichResult()
,
shake_topGOtableResult()
david_output_file <- system.file("extdata", "david_output_chart_BPonly_ifng_vs_naive.txt", package = "GeneTonic" ) res_enrich <- shake_davidResult(david_output_file)