crawl_gsms {GEOfastq}R Documentation

Crawls SRX pages for each GSM to get metadata.

Description

Goes to each GSM page to get SRX then to each SRX page to get some more metadata.

Usage

crawl_gsms(gsm_names, max.workers = 50)

Arguments

gsm_names

Character vector of GSMs.

max.workers

Maximum number of parallel workers to split task betweem

Value

data.frame

Examples

srp_meta <- crawl_gsms("GSM3031462")

# returns NULL because records on dbGAP for privacy reasons
srp_meta <- crawl_gsms("GSM2439650")

# example with empty values
srp_meta <- crawl_gsms('GSM4043025')


[Package GEOfastq version 1.1.0 Index]