GEM_GUI {GEM} | R Documentation |
The user friendly GUI for runing GEM package easily and quickly
GEM_GUI()
The GEM package provides a highly efficient R tool suite for performing epigenome wide association
studies (EWAS). GEM provides three major functions named GEM_Emodel
,
GEM_Gmodel
and GEM_GxEmodel
to study the interplay of Gene,
Environment and Methylation (GEM). Within GEM, the pre-existing "Matrix eQTL" package is
utilized and extended to study methylation quantitative trait loci (methQTL) and the
interaction of genotype and environment (GxE) to determine DNA methylation variation,
using matrix based iterative correlation and memory-efficient data analysis.
GEM can facilitate reliable genome-wide methQTL and GxE analysis on a standard laptop
computer within minutes.
GEM model analysis results
interactive() #GEM_GUI() ## remove the hash symbol to run