TF_target_database {FindIT2} | R Documentation |
TF-target database
data(TF_target_database)
a data frame
http://bioinformatics.psb.ugent.be/webtools/iGRN/pages/download
## Not run: # source library(dplyr) data <- read.table("~/reference/annoation/Athaliana/TF_target/iGRN_network_full.txt", sep = "\t", stringsAsFactors = FALSE) data %>% rename(TF_id = V1, target_gene = V2) %>% select(TF_id, target_gene) %>% TF_target_database <- filter(TF_id %in% c("AT1G28300", "AT5G63790", "AT5G24110", "AT3G23250")) %>% as.data.frame() save(TF_target_database, file = "inst/extdata/TF_target_database.rda", version = 2, compress = "bzip2") ## End(Not run)