cal_MSE {FEAST} | R Documentation |
Standard way to preprocess the count matrix. It is the QC step for the genes.
cal_MSE(Ynorm, cluster, return_mses = FALSE)
Ynorm |
A normalized gene expression matrix. If not, we will normalize it for you. |
cluster |
The clustering outcomes. Specifically, they are cluster labels. |
return_mses |
True or False indicating whether returning the MSE. |
The MSE of the clustering centers with the predicted Y.
data(Yan) Ynorm = Norm_Y(Y) cluster = trueclass MSE_res = cal_MSE(Ynorm, cluster)