subsetParent {ExperimentSubset} | R Documentation |
Retrieves a complete 'subset to parent' link from a specified subset.
subsetParent(x, subsetName) ## S4 method for signature 'SubsetRangedSummarizedExperiment' subsetParent(x, subsetName) ## S4 method for signature 'SubsetSingleCellExperiment' subsetParent(x, subsetName) ## S4 method for signature 'SubsetSummarizedExperiment' subsetParent(x, subsetName) ## S4 method for signature 'SubsetSpatialExperiment' subsetParent(x, subsetName) ## S4 method for signature 'SubsetTreeSummarizedExperiment' subsetParent(x, subsetName)
x |
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subsetName |
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A list
containing the 'subset to parent' link.
data(sce_chcl, package = "scds") es <- ExperimentSubset(sce_chcl) es <- createSubset(es, "subset1", rows = c(10,11,50,56,98,99,102,105,109, 200), cols = c(20,21,40,45,90,99,100,123,166,299), parentAssay = "counts") assay(es, "subset1", subsetAssayName = "subset1pAssay") <- assay(es, "subset1")[,] + 1 subsetParent(es, "subset1pAssay")