plot.cytoglm {CytoGLMM} | R Documentation |
Plot bootstraped coefficients
## S3 method for class 'cytoglm' plot(x, order = FALSE, separate = FALSE, ...)
x |
A |
order |
Order the markers according to the mangintute of the coefficients |
separate |
create two separate |
... |
Other parameters |
ggplot2
object
set.seed(23) df <- generate_data() protein_names <- names(df)[3:12] df <- dplyr::mutate_at(df, protein_names, function(x) asinh(x/5)) glm_fit <- CytoGLMM::cytoglm(df, protein_names = protein_names, condition = "condition", group = "donor", num_boot = 10) # in practice >=1000 plot(glm_fit)