function_desigmat_contrast_diffcytDSlimma_fixedeffect {CyTOFpower}R Documentation

Design and contrast matrices for diffcyt-DS-limma with fixed effect.

Description

Design and contrast matrices for diffcyt-DS-limma with fixed effect.

Usage

function_desigmat_contrast_diffcytDSlimma_fixedeffect(df_experiment_info)

Arguments

df_experiment_info

data.frame, information about the experiment (donor IDs, group IDs and sample IDs).

Details

Function to create the design matrix and contrast for the diffcyt-DS-limma model with fixed effect.

Value

list with 3 slots: - design_matrix: the design matrix; - contrast: the contrast matrix; - effect: the specification of the "fixed" effect.


[Package CyTOFpower version 0.99.4 Index]