function_run_diffcytDSlimma {CyTOFpower} | R Documentation |
Run diffcyt-DS-limma model.
function_run_diffcytDSlimma( ls_desigmat_contrast, df_experiment_info, ls_features )
ls_desigmat_contrast |
list, with design and contrast matrices. |
df_experiment_info |
data.frame, information about the experiment (donor IDs, group IDs and sample IDs). |
ls_features |
list, with cell counts and medians for each markers. |
Function to run diffcyt-DS-limma model from the diffcyt package.
list with 2 slots: - model_fit: the model fit; - result_summary: results of the model for each marker.