function_run_diffcytDSLMM {CyTOFpower} | R Documentation |
Run diffcyt-DS-LMM model.
function_run_diffcytDSLMM(ls_form_contrast, df_experiment_info, ls_features)
ls_form_contrast |
list, with formula and constrat matrix. |
df_experiment_info |
data.frame, information about the experiment (donor IDs, group IDs and sample IDs). |
ls_features |
list, with cell counts and medians for each markers. |
Function to run diffcyt-DS-LMM model from the diffcyt package.
list with 2 slots: - model_fit: the model fit; - result_summary: results of the model for each marker.