preprocess_TPM {ChromSCape}R Documentation

Preprocess scExp - Transcripts per Million (TPM)

Description

Preprocess scExp - Transcripts per Million (TPM)

Usage

preprocess_TPM(scExp)

Arguments

scExp

A SingleCellExperiment Object

Value

A SingleCellExperiment object.

Examples


raw <- create_scDataset_raw()
scExp = create_scExp(raw$mat, raw$annot)
scExp = preprocess_TPM(scExp)
head(SingleCellExperiment::normcounts(scExp))


[Package ChromSCape version 1.3.22 Index]