plotAnnoPie.csAnno {ChIPseeker} | R Documentation |
pieplot from peak genomic annotation
plotAnnoPie.csAnno( x, ndigit = 2, cex = 0.8, col = NA, legend.position = "rightside", pie3D = FALSE, radius = 0.8, ... )
x |
csAnno object |
ndigit |
number of digit to round |
cex |
label cex |
col |
color |
legend.position |
topright or other. |
pie3D |
plot in 3D or not |
radius |
radius of Pie |
... |
extra parameter |
pie plot of peak genomic feature annotation
Guangchuang Yu https://yulab-smu.top
## Not run: require(TxDb.Hsapiens.UCSC.hg19.knownGene) txdb <- TxDb.Hsapiens.UCSC.hg19.knownGene peakfile <- system.file("extdata", "sample_peaks.txt", package="chipseeker") peakAnno <- annotatePeak(peakfile, TxDb=txdb) plotAnnoPie(peakAnno) ## End(Not run)