plotPeakProf {ChIPseeker}R Documentation

plotPeakProf

Description

plot the profile of peaks

Usage

plotPeakProf(
  tagMatrix,
  conf,
  xlab = "Genomic Region (5'->3')",
  ylab = "Peak Count Frequency",
  facet = "none",
  free_y = TRUE,
  ...
)

Arguments

tagMatrix

tagMatrix or a list of tagMatrix

conf

confidence interval

xlab

x label

ylab

y label

facet

one of 'none', 'row' and 'column'

free_y

if TRUE, y will be scaled by AvgProf

...

additional parameter

Details

this function combined previous function plotAvgProf()

Value

ggplot object


[Package ChIPseeker version 1.30.0 Index]