fancy_name_contigs {CellaRepertorium} | R Documentation |
Generate a legible name for a series of contigs
fancy_name_contigs(contig_tbl, prefix)
contig_tbl |
An |
prefix |
an optional prefix added to each contig, eg, possibly a sample id. |
character
library(dplyr) contig_anno_path = system.file('extdata', 'all_contig_annotations_balbc_1.csv.xz', package = 'CellaRepertorium') contig_anno = readr::read_csv(contig_anno_path) contig_anno = contig_anno %>% mutate(fancy_name = fancy_name_contigs(., prefix = 'b6_1')) stopifnot(!any(duplicated(contig_anno$fancy_name)))