makeAncoraFiles {CNEr} | R Documentation |
Make ancora format files from GRangePairs
of CNE
makeAncoraFiles(cne, outputDir = ".", genomeFirst = "first", genomeSecond = "second", threshold = "50_50")
cne |
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outputDir |
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genomeFirst,genomeSecond |
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threshold |
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The filenames of output.
This function is mainly for internal use in Lenhard group.
Ge Tan
data(cneFinalListDanRer10Hg38) cne <- CNEFinal(cneFinalListDanRer10Hg38[["45_50"]]) makeAncoraFiles(cne, genomeFirst = "danRer10", genomeSecond = "hg38", threshold = "45_50")