quick_run {CIMICE}R Documentation

Run CIMICE defaults

Description

This function executes CIMICE analysis on a dataset using default settings.

Usage

quick_run(dataset, mode = "CAPRI")

Arguments

dataset

a mutational matrix as a (sparse) matrix

mode

indicates the used input format. Must be either "CAPRI" or "CAPRIpop"

Value

a list object representing the graph computed by CIMICE with the structure 'list(topology = g, weights = W, labels = labels, freqs=freqs)'

Examples

quick_run(example_dataset())


[Package CIMICE version 1.1.3 Index]