plot_ora_single {CEMiTool}R Documentation

ORA visualization for one module

Description

ORA visualization for one module

Usage

plot_ora_single(
  es,
  ordr_by = "p.adjust",
  max_length = 50,
  pv_cut = 0.05,
  graph_color = "#4169E1",
  title = "Over Representation Analysis"
)

Arguments

es

a data.frame from ora function containing only one module

ordr_by

column to order the data.frame

max_length

max length of a gene set name

pv_cut

p-value cuttoff

graph_color

color of bars

title

title of the graph

Value

a list with ggplot2 object and the number of significant gene sets


[Package CEMiTool version 1.17.0 Index]