GeneExpSE {CAGEr} | R Documentation |
Get or set a SummarizedExperiment
using the gene expression
data in the experiment slot geneExpMatrix
and the sample metadata
of the CAGEexp
object.
GeneExpSE(object) ## S4 method for signature 'CAGEexp' GeneExpSE(object)
object |
A |
Charles Plessy
Other CAGEr accessor methods:
CTSSclusteringMethod()
,
CTSScoordinatesGR()
,
CTSScumulativesTagClusters()
,
CTSSnormalizedTpmDF()
,
CTSStagCountDF()
,
GeneExpDESeq2()
,
consensusClustersGR()
,
expressionClasses()
,
genomeName()
,
inputFilesType()
,
inputFiles()
,
librarySizes()
,
sampleLabels()
,
seqNameTotalsSE()
,
tagClustersGR()
GeneExpSE(exampleCAGEexp)