.find_neighbors {BayesSpace}R Documentation

Find neighboring spots based on array coordinates

Description

Find neighboring spots based on array coordinates

Usage

.find_neighbors(sce, platform)

Arguments

sce

SingleCellExperiment

platform

If "Visium", select six neighboring spots around center; if "ST", select four adjacent spots.

Value

df_j a list of neighbor indices (zero-indexed) for each spot


[Package BayesSpace version 1.4.0 Index]