celltypes {BUSseq} | R Documentation |
BUSseq_MCMC
Function
The function gives the cell-type indicators of the output
SingleCellExperiment
object.
celltypes(sce_BUSseqfit)
sce_BUSseqfit |
An output |
w.est |
The estimated cell-type indicators, an N-dimensional vector, where N is the total number of cells. |
Fangda Song
Song, Fangda, Ga Ming Angus Chan, and Yingying Wei. Flexible experimental designs for valid single-cell RNA-sequencing experiments allowing batch effects correction. Nature communications 11, no. 1 (2020): 1-15.
# "BUSseqfits_example" is an example output BUSseqfits_example celltypes_est <- celltypes(BUSseqfits_example)