get_intron_flanks {BUSpaRse} | R Documentation |
Get flanked intronic ranges
get_intron_flanks(grl, L, get_junctions)
grl |
A |
L |
Read length. |
get_junctions |
Logical, whether to also return exon-exon junctions. |
If get_junctions
is FALSE
, then a GRanges
object
with ranges for flanked intronic regions. If get_junctions
is TRUE
, then
in addition to the flanked intronic ranges, a CompressedGRangesList
with
exon-exon junction ranges and ranges for transcripts without introns.