AMARETTO_Preprocess {AMARETTO} | R Documentation |
Wrapper code that analyzes process TCGA GISTIC (CNV) and gene expression (rna-seq or microarray) data via one call
AMARETTO_Preprocess(DataSetDirectories = DataSetDirectories, BatchData = BatchData)
DataSetDirectories |
DataSetDirectories |
BatchData |
BatchData |
result
## Not run: TargetDirectory <- "Downloads" # path to data download directory CancerSite <- 'CHOL' DataSetDirectories <- AMARETTO_Download(CancerSite,TargetDirectory) ProcessedData <- AMARETTO_Preprocess(DataSetDirectories,BatchData) ## End(Not run)